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Publication Detail
PomBase: a comprehensive online resource for fission yeast.
  • Publication Type:
    Journal article
  • Publication Sub Type:
    Journal Article
  • Authors:
    Wood V, Harris MA, McDowall MD, Rutherford K, Vaughan BW, Staines DM, Aslett M, Lock A, Bähler J, Kersey PJ, Oliver SG
  • Publication date:
    01/2012
  • Pagination:
    D695, D699
  • Journal:
    Nucleic Acids Res
  • Volume:
    40
  • Issue:
    Database issue
  • Status:
    Published
  • Country:
    England
  • PII:
    gkr853
  • Language:
    eng
  • Keywords:
    Databases, Genetic, Genome, Fungal, Genomics, Internet, Molecular Sequence Annotation, Phenotype, Schizosaccharomyces
Abstract
PomBase (www.pombase.org) is a new model organism database established to provide access to comprehensive, accurate, and up-to-date molecular data and biological information for the fission yeast Schizosaccharomyces pombe to effectively support both exploratory and hypothesis-driven research. PomBase encompasses annotation of genomic sequence and features, comprehensive manual literature curation and genome-wide data sets, and supports sophisticated user-defined queries. The implementation of PomBase integrates a Chado relational database that houses manually curated data with Ensembl software that supports sequence-based annotation and web access. PomBase will provide user-friendly tools to promote curation by experts within the fission yeast community. This will make a key contribution to shaping its content and ensuring its comprehensiveness and long-term relevance.
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